{"id":7269,"date":"2019-05-14T10:06:13","date_gmt":"2019-05-13T22:06:13","guid":{"rendered":"https:\/\/thesislink.aut.ac.nz\/?p=7269"},"modified":"2019-05-14T10:06:21","modified_gmt":"2019-05-13T22:06:21","slug":"why-you-should-pick-all-the-cherries","status":"publish","type":"post","link":"https:\/\/thesislink.aut.ac.nz\/?p=7269","title":{"rendered":"Why You Should Pick All the Cherries"},"content":{"rendered":"\n<p>On cherry trees, as in data, there will be some pieces of fruit that look great &#8211; so plump and red that you want to sink your teeth right in (after taking a pic for Instagram, of course). There will be other pieces that are a bit wonky, or unripe, or asymmetrical, or rotten. They look unappetizing, and you don&#8217;t really want to pick them at all.<\/p>\n\n\n\n<p>It&#8217;s tempting to pick only the freshest, juiciest-looking fruit. This is called &#8216;cherry picking&#8217; and it&#8217;s a great move if you&#8217;re a jam-maker, but a terrible idea if you&#8217;re a researcher. <\/p>\n\n\n\n<p>In a research context, &#8216;cherry picking&#8217; refers to the practice of choosing only the pieces of data or evidence that support your hypothesis. In other words, you have a point you want to make, and you have a whole lot of data &#8211; but you pick only the &#8216;juiciest&#8217; pieces to report. <\/p>\n\n\n\n<p>Researchers who &#8216;cherry pick&#8217; aren&#8217;t using <em>false<\/em> data; they are simply using <em>incomplete<\/em> data. But it&#8217;s dishonest all the same.<\/p>\n\n\n\n<figure class=\"wp-block-image\"><img data-recalc-dims=\"1\" loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"576\" src=\"https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?resize=1024%2C576&#038;ssl=1\" alt=\"\" class=\"wp-image-7270\" srcset=\"https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?w=1024&amp;ssl=1 1024w, https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?resize=150%2C84&amp;ssl=1 150w, https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?resize=300%2C169&amp;ssl=1 300w, https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?resize=768%2C432&amp;ssl=1 768w, https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?resize=750%2C422&amp;ssl=1 750w\" sizes=\"auto, (max-width: 1024px) 100vw, 1024px\" \/><figcaption>Image by <a href=\"https:\/\/www.flickr.com\/photos\/enteelk\/\">Nadee Talagala<\/a>, licensed under <a href=\"https:\/\/creativecommons.org\/licenses\/by-nc-sa\/2.0\/\">CC BY-NC-SA 2.0<\/a><\/figcaption><\/figure>\n\n\n\n<p>As researchers, we have to take the good data with the bad. Sometimes we get an outlier that seems completely rotten, but it&#8217;s still part of our data and it still needs to factor into our findings. <\/p>\n\n\n\n<p>For qualitative researchers working with focus groups, interviews, and surveys, that means taking care to represent the breadth of your participants&#8217; responses (and including a representative range of quotations).<\/p>\n\n\n\n<p>For quantitative researchers, that means reporting your results in a way that accurately represents your data as a whole, without avoiding any inconvenient outliers or data points that don&#8217;t support your hypotheses. <\/p>\n\n\n\n<p>And for all researchers, it&#8217;s important to synthesize others&#8217; research (for instance, in the literature review) in a way that represents the breath of knowledge available on a topic. <a href=\"https:\/\/www.theguardian.com\/commentisfree\/2011\/sep\/23\/bad-science-ben-goldacre\">Science writer Ben Goldacre has pointed out<\/a> a major paradox in the research world: individual experiments are designed to eliminate as much bias as possible, but the way that multiple sets of research findings are synthesized together is far less controlled. <\/p>\n\n\n\n<p>For instance, if I want to draw on existing research to prove that cherries are red, I could easily amass a bibliography full of articles about the ruby-coloured Bing, Brooks, and Tartarian varieties. But I&#8217;d better not ignore the fact that the Ranier variety is yellow. In fact, my analysis would be stronger for <em>including <\/em>the yellow variety, not ignoring it.<\/p>\n\n\n\n<p>Treating unexpected data responsibly is not only ethical &#8211; it&#8217;s also an opportunity for discovery. Case in point: the team on the Cancer Genome Project at the Wellcome Trust Sanger Institute were analyzing genomes of leukaemia patients when they <a href=\"https:\/\/www.nature.com\/articles\/469135a\">spotted something anomalous<\/a> in their data. They saw some drastic structural changes in chromosomes from one patient that didn&#8217;t fit the scientific understanding (at the time) of how DNA is damaged. <\/p>\n\n\n\n<p>Did the researchers conveniently ignore the strange data? No. Was it wrong? No. It was the basis of a huge discovery: cancer, which was previously understood to be caused by a slow accumulation of genetic mutations over time, could also be caused by a single chromosomal &#8216;explosion&#8217; (Stephens et al., 2011). That&#8217;s an absolute game-changer of a revelation, and it came from data that might have looked, to some, like a rotten cherry.<\/p>\n\n\n\n<p>So I say pick all the cherries and make use of each one, regardless of how much bird poo, mould, or rot infects it. Unless, as I&#8217;ve said, you&#8217;re making jam. In which case please, for the love of crumpets, pick the nice ones and pile on the sugar!<\/p>\n\n\n\n<p><strong>Sources<\/strong><\/p>\n\n\n\n<div style=\"padding-left: 4em; text-indent: -4em;\">\n<p>Stephens, P. J., Greenman, C. D., Fu, B., Yang, F., Bignell, G. R.,  Mudie, L. J., &#8230; &amp; McLaren, S. (2011). Massive genomic  rearrangement acquired in a single catastrophic event during cancer  development. <em>Cell<\/em>, <em>144<\/em>(1), 27-40. doi:  <a rel=\"noreferrer noopener\" href=\"https:\/\/doi.org\/10.1016\/j.cell.2010.11.055\" target=\"_blank\">10.1016\/j.cell.2010.11.055<\/a> <\/p>\n","protected":false},"excerpt":{"rendered":"<p>On cherry trees, as in data, there will be some pieces of fruit that look great &ndash; so plump and red that you want to sink your teeth right in [&hellip;]<\/p>\n","protected":false},"author":6725,"featured_media":7270,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[8],"tags":[124,47,62,77],"class_list":["post-7269","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-category-3","tag-analysis","tag-data","tag-qualitative","tag-quantitative"],"jetpack_featured_media_url":"https:\/\/i0.wp.com\/thesislink.aut.ac.nz\/wp-content\/uploads\/Cherrypicking.jpg?fit=1024%2C576&ssl=1","jetpack_sharing_enabled":true,"jetpack_shortlink":"https:\/\/wp.me\/p83npQ-1Tf","_links":{"self":[{"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/posts\/7269","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/users\/6725"}],"replies":[{"embeddable":true,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=7269"}],"version-history":[{"count":5,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/posts\/7269\/revisions"}],"predecessor-version":[{"id":7276,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/posts\/7269\/revisions\/7276"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=\/wp\/v2\/media\/7270"}],"wp:attachment":[{"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=7269"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=7269"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/thesislink.aut.ac.nz\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=7269"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}